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Slot: modified

Provenance links to subsequent modifications of the object record.

URI: reactome:modified Alias: modified

Applicable Classes

Name Description Modifies Slot
Reaction Standard reaction-like event with explicit transformed inputs and outputs no
Requirement Regulation-like assertion indicating that a regulator or participant is requi... no
ReferenceEntity Invariant reference identity used to connect multiple contextualized physical... no
Person Person record used primarily for provenance, authorship, and curation attribu... no
SequenceEntity Sequence-bearing physical entity linked to a stable reference sequence and op... no
Cell Cell or cell-like biological unit treated as a physical participant in an eve... no
ProteinDrug Drug represented as a protein therapeutic or protein-derived biologic no
Compartment Cellular or subcellular location object used to state where an event occurs o... no
Pathway Curated grouping of biologically related events representing a pathway or pat... no
CandidateSet Entity set whose members are candidates for fulfilling a shared biological ro... no
Disease Disease concept used to contextualize events and entities in pathological set... no
RnaDrug Drug represented as an RNA-based therapeutic agent no
Publication Publication record used as evidence or supporting documentation for curated b... no
Taxon Taxonomic concept used for taxonomic assignment or metadata no
ReferenceRnaSequence Reference identity for an RNA sequence no
Complex Physical entity composed of two or more component physical entities assembled... no
Event Biological occurrence or process unit in Reactome, covering both pathways and... no
PhysicalEntity Concrete biological participant whose identity reflects both underlying molec... no
ChemicalDrug Drug represented primarily as a chemical or small-molecule therapeutic agent no
Interaction Interaction record associated with an event or set of participants no
GoBiologicalProcessTerm Wrapper object for a GO biological process term used for pathway or event ali... no
ReferenceIsoform Reference sequence representing a specific isoform-level identity no
ReferenceGroup Grouped reference identity used when an invariant identity is represented at ... no
GoCellularComponentTerm Wrapper object for a GO cellular component term used in entity or location an... no
Polymer Polymer entity abstracted in terms of one or more repeated units no
ReferenceDatabase Metadata record describing an external database or authority used for identif... no
Depolymerization Event representing breakdown of a polymer into constituent or smaller units no
EntitySet Curated set of physical entities that are treated as functionally interchange... no
ReferenceDnaSequence Reference identity for a DNA sequence no
LiteratureReference Literature citation record, commonly representing a PubMed-indexed paper supp... no
AbstractModifiedResidue Feature record describing a modified residue or residue-level state on a sequ... no
BlackBoxEvent Reaction-like event included in the pathway model despite incomplete mechanis... no
InstanceEdit Provenance record describing a curation action such as creation, modification... no
Regulation Reified regulatory assertion linking a regulator physical entity to a regulat... no
ReferenceMolecule Reference identity for a small molecule, simple chemical, or chemically groun... no
PositiveRegulation Regulation that increases, enables, or positively influences the occurrence o... no
OrganismTaxon Organism taxon record representing the organismal context for entities and ev... no
GenomeEncodedEntity Physical entity whose existence is grounded in a genome-encoded product such ... no
Protein Protein physical entity linked to a reference gene product and optionally dec... no
Summation Narrative summary record containing prose that explains the biological meanin... no
OtherEntity Catch-all physical entity class for biologically relevant participants not co... no
ReferenceTherapeutic Reference identity for a therapeutic or intervention-oriented entity no
DatabaseObject Root class for most Reactome schema objects and the main provenance-bearing s... no
ReactionLikeEvent Event in which physical entities participate as inputs, outputs, regulators, ... no
GoMolecularFunctionTerm Wrapper object for a GO molecular function term used in Reactome catalysis mo... no
DatabaseIdentifier Cross-reference record that pairs an identifier string with a reference datab... no
Polymerization Event representing formation of a polymer from repeated or assembling units no
ReferenceGeneProduct Reference sequence corresponding to a gene product, typically protein-centric no
DefinedSet Entity set whose members are explicitly curated as the intended interchangeab... no
Drug Therapeutic or intervention-oriented physical entity modeled in the Reactome ... no
ReferenceSequence Reference identity for a sequence-bearing biomolecule no
SimpleEntity Simple molecular entity, typically a small molecule or other non-sequence-bas... no
CatalystActivity Reified catalytic assertion connecting a catalyst bearer, a GO molecular func... no
NegativeRegulation Regulation that decreases, inhibits, or negatively influences the occurrence ... no
ReactionTypeTerm Controlled vocabulary term used to characterize a reaction-like event no

Properties

Type and Range

Property Value
Range InstanceEdit
Domain Of DatabaseObject
Slot URI reactome:modified

Cardinality and Requirements

Property Value
Multivalued Yes

Comments

  • Multiple modifications are common across curation history.

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/reactome-ontology

Mappings

Mapping Type Mapped Value
self reactome:modified
native reactome:modified

LinkML Source

name: modified
description: Provenance links to subsequent modifications of the object record.
comments:
- Multiple modifications are common across curation history.
from_schema: https://w3id.org/reactome-ontology
rank: 1000
slot_uri: reactome:modified
alias: modified
domain_of:
- database_object
range: instance_edit
multivalued: true