Skip to content

Slot: id

Unique identifier for an instance in the serialized dataset.

URI: dcterms:identifier Alias: id

Applicable Classes

Name Description Modifies Slot
GoMolecularFunctionTerm Wrapper object for a GO molecular function term used in Reactome catalysis mo... no
GoCellularComponentTerm Wrapper object for a GO cellular component term used in entity or location an... no
GoBiologicalProcessTerm Wrapper object for a GO biological process term used for pathway or event ali... no
ReferenceDnaSequence Reference identity for a DNA sequence no
ProteinDrug Drug represented as a protein therapeutic or protein-derived biologic no
LiteratureReference Literature citation record, commonly representing a PubMed-indexed paper supp... no
OtherEntity Catch-all physical entity class for biologically relevant participants not co... no
Person Person record used primarily for provenance, authorship, and curation attribu... no
Requirement Regulation-like assertion indicating that a regulator or participant is requi... no
DatabaseObject Root class for most Reactome schema objects and the main provenance-bearing s... no
Event Biological occurrence or process unit in Reactome, covering both pathways and... no
ReferenceTherapeutic Reference identity for a therapeutic or intervention-oriented entity no
ReactionTypeTerm Controlled vocabulary term used to characterize a reaction-like event no
BlackBoxEvent Reaction-like event included in the pathway model despite incomplete mechanis... no
ReferenceIsoform Reference sequence representing a specific isoform-level identity no
Pathway Curated grouping of biologically related events representing a pathway or pat... no
ReactionLikeEvent Event in which physical entities participate as inputs, outputs, regulators, ... no
DefinedSet Entity set whose members are explicitly curated as the intended interchangeab... no
ReferenceMolecule Reference identity for a small molecule, simple chemical, or chemically groun... no
Polymerization Event representing formation of a polymer from repeated or assembling units no
NamedEntity Generic named entity used as a lightweight semantic root for serializable obj... no
RnaDrug Drug represented as an RNA-based therapeutic agent no
DatabaseIdentifier Cross-reference record that pairs an identifier string with a reference datab... no
CandidateSet Entity set whose members are candidates for fulfilling a shared biological ro... no
PositiveRegulation Regulation that increases, enables, or positively influences the occurrence o... no
InstanceEdit Provenance record describing a curation action such as creation, modification... no
EntitySet Curated set of physical entities that are treated as functionally interchange... no
Protein Protein physical entity linked to a reference gene product and optionally dec... no
Drug Therapeutic or intervention-oriented physical entity modeled in the Reactome ... no
Depolymerization Event representing breakdown of a polymer into constituent or smaller units no
ReferenceDatabase Metadata record describing an external database or authority used for identif... no
Compartment Cellular or subcellular location object used to state where an event occurs o... no
ReferenceSequence Reference identity for a sequence-bearing biomolecule no
Publication Publication record used as evidence or supporting documentation for curated b... no
Cell Cell or cell-like biological unit treated as a physical participant in an eve... no
Reaction Standard reaction-like event with explicit transformed inputs and outputs no
ReferenceGroup Grouped reference identity used when an invariant identity is represented at ... no
Disease Disease concept used to contextualize events and entities in pathological set... no
Complex Physical entity composed of two or more component physical entities assembled... no
Regulation Reified regulatory assertion linking a regulator physical entity to a regulat... no
SequenceEntity Sequence-bearing physical entity linked to a stable reference sequence and op... no
ReferenceEntity Invariant reference identity used to connect multiple contextualized physical... no
OrganismTaxon Organism taxon record representing the organismal context for entities and ev... no
PhysicalEntity Concrete biological participant whose identity reflects both underlying molec... no
Summation Narrative summary record containing prose that explains the biological meanin... no
ReferenceRnaSequence Reference identity for an RNA sequence no
NegativeRegulation Regulation that decreases, inhibits, or negatively influences the occurrence ... no
CatalystActivity Reified catalytic assertion connecting a catalyst bearer, a GO molecular func... no
Polymer Polymer entity abstracted in terms of one or more repeated units no
AbstractModifiedResidue Feature record describing a modified residue or residue-level state on a sequ... no
Taxon Taxonomic concept used for taxonomic assignment or metadata no
GenomeEncodedEntity Physical entity whose existence is grounded in a genome-encoded product such ... no
ChemicalDrug Drug represented primarily as a chemical or small-molecule therapeutic agent no
ReferenceGeneProduct Reference sequence corresponding to a gene product, typically protein-centric no
SimpleEntity Simple molecular entity, typically a small molecule or other non-sequence-bas... no
Interaction Interaction record associated with an event or set of participants no

Properties

Type and Range

Property Value
Range String
Domain Of NamedEntity
Slot URI dcterms:identifier

Cardinality and Requirements

Property Value
Required Yes
### Slot Characteristics
Property Value
Identifier Yes

Comments

  • This may be a local identifier, CURIE, URI, or other serialization key.

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/reactome-ontology

Mappings

Mapping Type Mapped Value
self dcterms:identifier
native reactome:id

LinkML Source

name: id
description: Unique identifier for an instance in the serialized dataset.
comments:
- This may be a local identifier, CURIE, URI, or other serialization key.
from_schema: https://w3id.org/reactome-ontology
rank: 1000
slot_uri: dcterms:identifier
identifier: true
alias: id
domain_of:
- named_entity
range: string
required: true