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Slot: has_reference_database

Reference database authority associated with a reference entity or database identifier.

URI: reactome:hasReferenceDatabase Alias: has_reference_database

Applicable Classes

Name Description Modifies Slot
ReferenceDnaSequence Reference identity for a DNA sequence no
ReferenceEntity Invariant reference identity used to connect multiple contextualized physical... yes
DatabaseIdentifier Cross-reference record that pairs an identifier string with a reference datab... no
ReferenceRnaSequence Reference identity for an RNA sequence no
ReferenceGeneProduct Reference sequence corresponding to a gene product, typically protein-centric no
ReferenceSequence Reference identity for a sequence-bearing biomolecule no
ReferenceIsoform Reference sequence representing a specific isoform-level identity no
ReferenceMolecule Reference identity for a small molecule, simple chemical, or chemically groun... no
ReferenceGroup Grouped reference identity used when an invariant identity is represented at ... no
ReferenceTherapeutic Reference identity for a therapeutic or intervention-oriented entity no

Properties

Type and Range

Property Value
Range ReferenceDatabase
Domain Of ReferenceEntity, DatabaseIdentifier
Slot URI reactome:hasReferenceDatabase

Cardinality and Requirements

Property Value

Comments

  • Provides the namespace and interpretation context for an identifier.

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/reactome-ontology

Mappings

Mapping Type Mapped Value
self reactome:hasReferenceDatabase
native reactome:has_reference_database

LinkML Source

name: has_reference_database
description: Reference database authority associated with a reference entity or database
  identifier.
comments:
- Provides the namespace and interpretation context for an identifier.
from_schema: https://w3id.org/reactome-ontology
rank: 1000
slot_uri: reactome:hasReferenceDatabase
alias: has_reference_database
domain_of:
- reference_entity
- database_identifier
range: reference_database
multivalued: false