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Slot: functional_consequence

missense, frameshift, nonsense, splice_site, synonymous, repeat_expansion, or structural

URI: alskb:functional_consequence Alias: functional_consequence

Applicable Classes

Name Description Modifies Slot
VariantProteinEffectAssociation Optional association for Variant -> Protein when protein consequence, predict... no

Properties

Type and Range

Property Value
Range String
Domain Of VariantProteinEffectAssociation

Cardinality and Requirements

Property Value
### Slot Characteristics
Property Value
Owner VariantProteinEffectAssociation

Identifier and Mapping Information

Schema Source

  • from schema: https://cair2015.github.io/als-kg

Mappings

Mapping Type Mapped Value
self alskb:functional_consequence
native alskb:functional_consequence

LinkML Source

name: functional_consequence
description: missense, frameshift, nonsense, splice_site, synonymous, repeat_expansion,
  or structural
from_schema: https://cair2015.github.io/als-kg
rank: 1000
alias: functional_consequence
owner: VariantProteinEffectAssociation
domain_of:
- VariantProteinEffectAssociation
range: string