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Slot: modified

Provenance links to subsequent modifications of the object record.

URI: reactome:modified Alias: modified

Applicable Classes

Name Description Modifies Slot
GoCellularComponentTerm Wrapper object for a GO cellular component term used in entity or location an... no
BlackBoxEvent Reaction-like event included in the pathway model despite incomplete mechanis... no
GenomeEncodedEntity Physical entity whose existence is grounded in a genome-encoded product such ... no
Cell Cell or cell-like biological unit treated as a physical participant in an eve... no
ReferenceMolecule Reference identity for a small molecule, simple chemical, or chemically groun... no
Person Person record used primarily for provenance, authorship, and curation attribu... no
OrganismTaxon Organism taxon record representing the organismal context for entities and ev... no
ReferenceGeneProduct Reference sequence corresponding to a gene product, typically protein-centric no
DatabaseObject Root class for most Reactome schema objects and the main provenance-bearing s... no
ReferenceGroup Grouped reference identity used when an invariant identity is represented at ... no
AbstractModifiedResidue Feature record describing a modified residue or residue-level state on a sequ... no
Polymerization Event representing formation of a polymer from repeated or assembling units no
ReferenceDnaSequence Reference identity for a DNA sequence no
Event Biological occurrence or process unit in Reactome, covering both pathways and... no
Depolymerization Event representing breakdown of a polymer into constituent or smaller units no
Taxon Taxonomic concept used for taxonomic assignment or metadata no
OtherEntity Catch-all physical entity class for biologically relevant participants not co... no
GoMolecularFunctionTerm Wrapper object for a GO molecular function term used in Reactome catalysis mo... no
Requirement Regulation-like assertion indicating that a regulator or participant is requi... no
ReferenceDatabase Metadata record describing an external database or authority used for identif... no
GoBiologicalProcessTerm Wrapper object for a GO biological process term used for pathway or event ali... no
CatalystActivity Reified catalytic assertion connecting a catalyst bearer, a GO molecular func... no
ReferenceEntity Invariant reference identity used to connect multiple contextualized physical... no
RnaDrug Drug represented as an RNA-based therapeutic agent no
Reaction Standard reaction-like event with explicit transformed inputs and outputs no
InstanceEdit Provenance record describing a curation action such as creation, modification... no
ReactionTypeTerm Controlled vocabulary term used to characterize a reaction-like event no
NegativeRegulation Regulation that decreases, inhibits, or negatively influences the occurrence ... no
CandidateSet Entity set whose members are candidates for fulfilling a shared biological ro... no
ReactionLikeEvent Event in which physical entities participate as inputs, outputs, regulators, ... no
LiteratureReference Literature citation record, commonly representing a PubMed-indexed paper supp... no
ChemicalDrug Drug represented primarily as a chemical or small-molecule therapeutic agent no
Drug Therapeutic or intervention-oriented physical entity modeled in the Reactome ... no
DefinedSet Entity set whose members are explicitly curated as the intended interchangeab... no
ReferenceTherapeutic Reference identity for a therapeutic or intervention-oriented entity no
Compartment Cellular or subcellular location object used to state where an event occurs o... no
Regulation Reified regulatory assertion linking a regulator physical entity to a regulat... no
Publication Publication record used as evidence or supporting documentation for curated b... no
ProteinDrug Drug represented as a protein therapeutic or protein-derived biologic no
DatabaseIdentifier Cross-reference record that pairs an identifier string with a reference datab... no
ReferenceIsoform Reference sequence representing a specific isoform-level identity no
Interaction Interaction record associated with an event or set of participants no
ReferenceRnaSequence Reference identity for an RNA sequence no
Summation Narrative summary record containing prose that explains the biological meanin... no
Disease Disease concept used to contextualize events and entities in pathological set... no
PositiveRegulation Regulation that increases, enables, or positively influences the occurrence o... no
Pathway Curated grouping of biologically related events representing a pathway or pat... no
SequenceEntity Sequence-bearing physical entity linked to a stable reference sequence and op... no
Polymer Polymer entity abstracted in terms of one or more repeated units no
PhysicalEntity Concrete biological participant whose identity reflects both underlying molec... no
Protein Protein physical entity linked to a reference gene product and optionally dec... no
Complex Physical entity composed of two or more component physical entities assembled... no
ReferenceSequence Reference identity for a sequence-bearing biomolecule no
SimpleEntity Simple molecular entity, typically a small molecule or other non-sequence-bas... no
EntitySet Curated set of physical entities that are treated as functionally interchange... no

Properties

Type and Range

Property Value
Range InstanceEdit
Domain Of DatabaseObject
Slot URI reactome:modified

Cardinality and Requirements

Property Value
Multivalued Yes

Comments

  • Multiple modifications are common across curation history.

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/reactome-ontology

Mappings

Mapping Type Mapped Value
self reactome:modified
native reactome:modified

LinkML Source

name: modified
description: Provenance links to subsequent modifications of the object record.
comments:
- Multiple modifications are common across curation history.
from_schema: https://w3id.org/reactome-ontology
rank: 1000
slot_uri: reactome:modified
alias: modified
domain_of:
- database_object
range: instance_edit
multivalued: true