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Slot: has_reference_database

Reference database authority associated with a reference entity or database identifier.

URI: reactome:hasReferenceDatabase Alias: has_reference_database

Applicable Classes

Name Description Modifies Slot
ReferenceRnaSequence Reference identity for an RNA sequence no
ReferenceGroup Grouped reference identity used when an invariant identity is represented at ... no
ReferenceDnaSequence Reference identity for a DNA sequence no
ReferenceTherapeutic Reference identity for a therapeutic or intervention-oriented entity no
ReferenceMolecule Reference identity for a small molecule, simple chemical, or chemically groun... no
DatabaseIdentifier Cross-reference record that pairs an identifier string with a reference datab... no
ReferenceSequence Reference identity for a sequence-bearing biomolecule no
ReferenceEntity Invariant reference identity used to connect multiple contextualized physical... yes
ReferenceGeneProduct Reference sequence corresponding to a gene product, typically protein-centric no
ReferenceIsoform Reference sequence representing a specific isoform-level identity no

Properties

Type and Range

Property Value
Range ReferenceDatabase
Domain Of ReferenceEntity, DatabaseIdentifier
Slot URI reactome:hasReferenceDatabase

Cardinality and Requirements

Property Value

Comments

  • Provides the namespace and interpretation context for an identifier.

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/reactome-ontology

Mappings

Mapping Type Mapped Value
self reactome:hasReferenceDatabase
native reactome:has_reference_database

LinkML Source

name: has_reference_database
description: Reference database authority associated with a reference entity or database
  identifier.
comments:
- Provides the namespace and interpretation context for an identifier.
from_schema: https://w3id.org/reactome-ontology
rank: 1000
slot_uri: reactome:hasReferenceDatabase
alias: has_reference_database
domain_of:
- reference_entity
- database_identifier
range: reference_database
multivalued: false