Skip to content

Slot: start_coordinate

Start coordinate of a subsequence, fragment, or feature-bearing region on a sequence entity.

URI: reactome:startCoordinate Alias: start_coordinate

Applicable Classes

Name Description Modifies Slot
SequenceEntity Sequence-bearing physical entity linked to a stable reference sequence and op... no
Protein Protein physical entity linked to a reference gene product and optionally dec... no

Properties

Type and Range

Property Value
Range Integer
Domain Of SequenceEntity
Slot URI reactome:startCoordinate

Cardinality and Requirements

Property Value

Comments

  • Useful for proteolytic fragments, domains, and sequence-trimmed entity forms.

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/reactome-ontology

Mappings

Mapping Type Mapped Value
self reactome:startCoordinate
native reactome:start_coordinate

LinkML Source

name: start_coordinate
description: Start coordinate of a subsequence, fragment, or feature-bearing region
  on a sequence entity.
comments:
- Useful for proteolytic fragments, domains, and sequence-trimmed entity forms.
from_schema: https://w3id.org/reactome-ontology
rank: 1000
slot_uri: reactome:startCoordinate
alias: start_coordinate
domain_of:
- sequence_entity
range: integer
multivalued: false