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Slot: is_in_disease_context

Boolean flag indicating that the represented entity is contextualized to a disease state.

URI: reactome:isInDiseaseContext Alias: is_in_disease_context

Applicable Classes

Name Description Modifies Slot
EntitySet Curated set of physical entities that are treated as functionally interchange... no
SequenceEntity Sequence-bearing physical entity linked to a stable reference sequence and op... no
Complex Physical entity composed of two or more component physical entities assembled... no
Cell Cell or cell-like biological unit treated as a physical participant in an eve... no
ProteinDrug Drug represented as a protein therapeutic or protein-derived biologic no
PhysicalEntity Concrete biological participant whose identity reflects both underlying molec... no
DefinedSet Entity set whose members are explicitly curated as the intended interchangeab... no
Drug Therapeutic or intervention-oriented physical entity modeled in the Reactome ... no
ChemicalDrug Drug represented primarily as a chemical or small-molecule therapeutic agent no
SimpleEntity Simple molecular entity, typically a small molecule or other non-sequence-bas... no
OtherEntity Catch-all physical entity class for biologically relevant participants not co... no
CandidateSet Entity set whose members are candidates for fulfilling a shared biological ro... no
GenomeEncodedEntity Physical entity whose existence is grounded in a genome-encoded product such ... no
Protein Protein physical entity linked to a reference gene product and optionally dec... no
Polymer Polymer entity abstracted in terms of one or more repeated units no
RnaDrug Drug represented as an RNA-based therapeutic agent no

Properties

Type and Range

Property Value
Range Boolean
Domain Of PhysicalEntity
Slot URI reactome:isInDiseaseContext

Cardinality and Requirements

Property Value

Comments

  • This is a contextual flag and does not by itself define a disease ontology class.

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/reactome-ontology

Mappings

Mapping Type Mapped Value
self reactome:isInDiseaseContext
native reactome:is_in_disease_context

LinkML Source

name: is_in_disease_context
description: Boolean flag indicating that the represented entity is contextualized
  to a disease state.
comments:
- This is a contextual flag and does not by itself define a disease ontology class.
from_schema: https://w3id.org/reactome-ontology
rank: 1000
slot_uri: reactome:isInDiseaseContext
alias: is_in_disease_context
domain_of:
- physical_entity
range: boolean
multivalued: false