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Slot: ingest_date

Date of ETL ingest

URI: alskb:ingest_date Alias: ingest_date

Applicable Classes

Name Description Modifies Slot
Phenotype Phenotypic feature (HPO term) no
Drug Pharmaceutical compound (DrugBank model) no
Protein Protein product (UniProt model) no
DrugTargetAssociation Optional association for Drug -> MolecularEntity when action type, binding af... no
CellularComponent Gene Ontology Cellular Component term no
Disease Disease entity no
Variant Genetic sequence variant (ClinVar model) no
DiseaseSubtype Molecularly-defined disease subtype derived from clustering analysis (transcr... no
ProteinProteinInteractionAssociation Optional association for Protein -> Protein when interaction score, interacti... no
GeneExpressionAssociation Optional association for Gene -> Anatomy when expression level, specificity, ... no
ChemicalEntity Abstract base for chemical and pharmacological entities (drugs, exposures, me... no
Anatomy Anatomical structure (UBERON ontology) no
GeneDiseaseAssociation Optional association for Gene -> Disease when causal/risk/protective or corre... no
TranscriptionFactorRegulationAssociation Optional association for TranscriptionFactor -> Gene when direction, confiden... no
MolecularFunction Gene Ontology Molecular Function term no
Gene Human gene entity (Entrez/NCBI model) no
BiologicalConcept Abstract base for functional/biological concepts from GO and related ontologi... no
Relationship Abstract base for reified relationships (edges with explicit properties) no
VariantDiseaseAssociation Optional association for Variant -> Disease when variant-level evidence, clin... no
Association Abstract base for optional evidence-bearing associations no
Pathway Reactome pathway entity representing a curated biological pathway or reaction... no
OntologyClass Abstract base for entity classes (nodes in knowledge graph) no
DiseasePhenotypeAssociation Optional association for Disease -> Phenotype when the clinical feature requi... no
DiseaseOrPhenotype Abstract parent class for all disease/phenotype entities no
ExposureOrStressor Environmental exposure or chemical stressor from CTD ontology no
DrugDiseaseTherapeuticAssociation Optional association for Drug -> Disease when therapeutic indication, approva... no
MolecularEntity Abstract base for molecular-level entities (genes, proteins, variants) no
ExposureDiseaseAssociation Optional association for ExposureOrStressor -> Disease when epidemiology, mec... no
TranscriptionFactor Gene encoding a transcription factor (TF) no
VariantProteinEffectAssociation Optional association for Variant -> Protein when protein consequence, predict... no
ProteinPathwayAssociation Optional association for Protein -> Pathway when Reactome evidence code, sour... no
DiseaseDiseaseAssociation Optional association for Disease -> Disease when disease-disease edges need r... no
BiologicalProcess Gene Ontology Biological Process term no

Properties

Type and Range

Property Value
Range Date
Domain Of OntologyClass, Relationship, Association

Cardinality and Requirements

Property Value

Identifier and Mapping Information

Schema Source

  • from schema: https://cair2015.github.io/als-kg

Mappings

Mapping Type Mapped Value
self alskb:ingest_date
native alskb:ingest_date

LinkML Source

name: ingest_date
description: Date of ETL ingest
from_schema: https://cair2015.github.io/als-kg
rank: 1000
alias: ingest_date
domain_of:
- OntologyClass
- Relationship
- Association
range: date